pycellfit
latest
Overview and install
Package modules
pycellfit package
Submodules
pycellfit.utils module
pycellfit.junction module
pycellfit.edge module
pycellfit.tension_vector module
pycellfit.cell module
pycellfit.mesh module
pycellfit.constrained_circle_fit module
pycellfit.circle_fit_helpers module
pycellfit.segmentation_transform module
pycellfit.segmentation_transform_utils module
Module contents
pycellfit
Docs
»
Index
Edit on GitHub
Index
A
|
C
|
D
|
E
|
F
|
G
|
I
|
J
|
L
|
M
|
N
|
O
|
P
|
R
|
S
|
T
|
W
|
X
|
Y
A
add_cell() (pycellfit.mesh.Mesh method)
add_edge() (pycellfit.junction.Junction method)
add_edge_point() (pycellfit.cell.Cell method)
add_edge_points_and_junctions() (pycellfit.mesh.Mesh method)
angular_position() (pycellfit.edge.Edge method)
approximate_cell_center() (pycellfit.cell.Cell method)
C
calculate_edge_points() (pycellfit.edge.Edge method)
Cell (class in pycellfit.cell)
cell_labels (pycellfit.junction.Junction attribute)
center (pycellfit.edge.Edge attribute)
circle_fit() (pycellfit.edge.Edge method)
circle_fit_all_edges() (pycellfit.mesh.Mesh method)
collinear() (in module pycellfit.edge)
coordinates (pycellfit.junction.Junction attribute)
corresponding_tension_vector (pycellfit.edge.Edge attribute)
cw_around_circle (pycellfit.edge.Edge attribute)
D
degree (pycellfit.junction.Junction attribute)
distance() (in module pycellfit.edge)
E
Edge (class in pycellfit.edge)
edges (pycellfit.junction.Junction attribute)
end_node (pycellfit.edge.Edge attribute)
end_tangent_angle() (pycellfit.edge.Edge method)
F
fill_region() (in module pycellfit.segmentation_transform_utils)
find_cells_from_array() (pycellfit.mesh.Mesh method)
G
generate_maze() (pycellfit.cell.Cell method)
generate_mesh() (pycellfit.mesh.Mesh method)
I
id_iter (pycellfit.edge.Edge attribute)
(pycellfit.junction.Junction attribute)
J
Junction (class in pycellfit.junction)
L
label (pycellfit.cell.Cell attribute)
length (pycellfit.edge.Edge attribute)
linear (pycellfit.edge.Edge attribute)
location (pycellfit.edge.Edge attribute)
M
make_edges() (pycellfit.cell.Cell method)
make_edges_for_all_cells() (pycellfit.mesh.Mesh method)
map_unit_vectors_to_junctions() (pycellfit.edge.Edge method)
Mesh (class in pycellfit.mesh)
N
neighboring_cell_labels (pycellfit.cell.Cell attribute)
number_of_cells (pycellfit.mesh.Mesh attribute)
number_of_edge_points (pycellfit.cell.Cell attribute)
number_of_edges (pycellfit.mesh.Mesh attribute)
number_of_junctions (pycellfit.mesh.Mesh attribute)
number_of_quad_junctions (pycellfit.mesh.Mesh attribute)
number_of_triple_junctions (pycellfit.mesh.Mesh attribute)
O
outside() (pycellfit.edge.Edge method)
P
pad_with() (in module pycellfit.segmentation_transform_utils)
plot() (pycellfit.cell.Cell method)
(pycellfit.edge.Edge method)
(pycellfit.junction.Junction method)
(pycellfit.mesh.Mesh method)
plot_circle() (pycellfit.edge.Edge method)
plot_tangent() (pycellfit.edge.Edge method)
plot_tensions() (pycellfit.mesh.Mesh method)
plot_unit_vectors() (pycellfit.junction.Junction method)
pycellfit (module)
,
[1]
pycellfit.cell (module)
pycellfit.edge (module)
pycellfit.junction (module)
pycellfit.mesh (module)
pycellfit.segmentation_transform (module)
pycellfit.segmentation_transform_utils (module)
pycellfit.utils (module)
R
radius (pycellfit.edge.Edge attribute)
read_segmented_image() (in module pycellfit.utils)
remove_cell() (pycellfit.mesh.Mesh method)
remove_edge() (pycellfit.junction.Junction method)
S
skeleton_to_watershed() (in module pycellfit.segmentation_transform)
solve_tensions() (pycellfit.mesh.Mesh method)
solve_tensions_new() (pycellfit.mesh.Mesh method)
solve_tensions_new2() (pycellfit.mesh.Mesh method)
split_line_multiple() (pycellfit.edge.Edge method)
split_line_single() (pycellfit.edge.Edge method)
start_node (pycellfit.edge.Edge attribute)
start_tangent_angle() (pycellfit.edge.Edge method)
T
tension_vectors (pycellfit.junction.Junction attribute)
W
watershed_to_skeleton() (in module pycellfit.segmentation_transform)
X
x (pycellfit.junction.Junction attribute)
xc (pycellfit.edge.Edge attribute)
Y
y (pycellfit.junction.Junction attribute)
yc (pycellfit.edge.Edge attribute)
Read the Docs
v: latest
Versions
latest
stable
0.2.3
0.2.2
0.2.1
0.2.0
0.1.0
0.0.7
Downloads
pdf
html
epub
On Read the Docs
Project Home
Builds
Free document hosting provided by
Read the Docs
.